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Accepted Papers

1. Regular Papers


PaperID

Title

Author

Category

B211

Manifold learning reveals nonlinear structure in metagenomic profiles

Xingpeng Jiang and Huiyue Shen

Genomics and Molecular Structure, Function and Evolution

B225

Efficient Filtration for Similarity Search with Spaced k-mer Neighbors

Weiming Li, Bin Ma, and Kaizhong Zhang

Computational Systems Biology

B233

Robust Segmentation of Biomedical Figures Toward an Image-based Document Retrieval

Luis Lopez, Jingyi Yu, Catalina Tudor, Cecilia Arighi, Hongzhan Huang, K Vijay-Shanker, and Cathy Wu

Medical Informatics and Translational Bioinformatics

B236

Predicting distant metastasis in breast cancer using ensemble classifier based on context-specific miRNA regulation modules

Xionghui Zhou and Juan Liu

Medical Informatics and Translational Bioinformatics

B258

Integrating Protein Networks for Identifying Cooperative miRNA Activity in Disease Gene Signatures

Mohammed Alshalalfa and Reda Alhajj

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B260

PPIExtractor: A Protein-Protein Interaction Extractor for Biomedical Literature

Zhihao Yang, Zhehuan Zhao, Yanpeng Li, Yuncui Hu, and Hongfei Lin

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B263

A Log-Linear Graphical Model for Inferring Genetic Networks from High-Throughput Sequencing Data

Genevera Allen and Zhandong Liu

Computational Systems Biology

B264

Drug-induced QT Prolongation Prediction Using Co-regularized Multi-view Learning

Jintao Zhang, Gerald Lushington, and Jun Huan

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B268

MultiFacTV: Finding Modules from Higher-order Gene Expression Profiles with Time Dimension

Xutao Li, Yunming Ye, Michael Ng, and Qingyao Wu

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B276

Epileptic EEG Signal Analysis and Identification Based On Nonlinear Features

Yuedong Song and Jiaxiang Zhang

Medical Informatics and Translational Bioinformatics

B278

Modeling Semantic Influence for Biomedical Research Topics using MeSH Hierarchy

Dan He

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B284

A Monte Carlo Approach to Biomedical Timeseries Search

Jonathan Woodbridge, Bobak Mortazavi, Majid Sarrafzadeh, and Alex Bui

Medical Informatics and Translational Bioinformatics

B285

Prediction of Novel Systems Components in Cell Cycle Regulation in Malaria Parasite by Subnetwork Alignments

Hong Cai, Changjin Hong, Jianying Gu, Timothy Lilburn, Rui Kuang, and Yufeng Wang

Computational Systems Biology

B289

Multi-Instance Learning for Skin Biopsy Image Features Recognition

Gang Zhang, Xiangyang Shu, Yunting Liang, Shuyi Chen, and Jian Yin

Medical Informatics and Translational Bioinformatics

B293

LSH-Div: Species Diversity Estimation using Locality Sensitive Hashing

Zeehasham Rasheed, Huzefa Rangwala, and Daniel Barbara

Genomics and Molecular Structure, Function and Evolution

B297

M-Finder: functional association mining from protein interaction networks weighted by semantic similarity

Young-Rae Cho, Tak Chien Chiam, and Yanxin Lu

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B298

Significance Analysis by Minimizing False Discovery Rate

Yuanzhe Bei and Pengyu Hong

Computational Systems Biology

B299

SiS: Significant Subnetworks in Massive Number of Network Topologies

Md Mahmudul Hasan, Yusuf Kavurucu, and Tamer Kahveci

Computational Systems Biology

B303

Early Classification of Multivariate Time Series Using a Hybrid HMM/SVM model

Mohamed Ghalwash, Dusan Ramljak, and Zoran Obradovic

Medical Informatics and Translational Bioinformatics

B307

Efficient Basin Hopping in the Protein Energy Surface

Brian Olson and Amarda Shehu

Genomics and Molecular Structure, Function and Evolution

B310

Identifying Context-Specific Transcription Factor Targets from Prior Knowledge and Gene Expression Data

Elana J Fertig, Alexander V Favorov, and Michael F Ochs

Computational Systems Biology

B314

Integration of Multiple Annotators by Aggregating Experts and Filtering Novices

Ping Zhang and Zoran Obradovic

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B319

Network-based Inferring Drug-Disease Associations from Chemical, Genomic and Phenotype Data

Yu-Fen Huang, Hsiang-Yuan Yeh, and Von-Wun Soo

Medical Informatics and Translational Bioinformatics

B320

A Data Mining Approach for Optimization of Acute Inflammation Therapy

Vladan Radosavljevic, Kosta Ristovski, and Zoran Obradovic

Medical Informatics and Translational Bioinformatics

B332

Efficient Mining Sequential Patterns for Structural Motifs with Gap Constraints

Chiang-Chi Liao, and Ming-Syan Chen

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B339

Parallel Simulation of Apoptotic Receptor-Clustering on GPGPU Many-Core Architectures

Claus Braun, Markus Daub, Alexander Schöll, Guido Schneider, and Hans-Joachim Wunderlich

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B343

Using Similarity Learning to Improve Network-based Gene Function Prediction

Ngo Phuong Nhung and Tu Minh Phuong

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B346

Aligning protein-protein interaction networks using random neural networks

Hang Phan, Michael Sternberg, and Erol Gelenbe

Computational Systems Biology

B364

Prediction of Human Immunodeficiency Virus Type 1 Drug Resistance: Representation of Target Sequence Mutational Patterns via an n-Grams Approach

Majid Masso

Medical Informatics and Translational Bioinformatics

B366

Improving Interacting Residue Prediction Using Long-Distance Information in Hidden Markov Models

Colin Kern, Alvaro Gonzalez, Li Liao, and Vijay Shanker

Genomics and Molecular Structure, Function and Evolution

B378

Improving Health Records Search using Multiple Query Expansion Collections

Dongqing Zhu and Ben Carterette

Medical Informatics and Translational Bioinformatics

B381

Efficient fluctuation analysis of biochemical pathways beyond the linear noise approximation using iNA

Philipp Thomas, Hannes Matuschek, and Ramon Grima

Computational Systems Biology

B385

Data Driven Knowledge Acquisition Method for Domain Knowledge Enrichment in the Healthcare

Sujan Perera, Cory Henson, Krishnaprasad Thirunarayan, Amit Sheth, and Suhas Nair

Healthcare Informatics

B388

Identifying Protein Complexes Based on Local Fitness Method

Jun Ren, Jianxin Wang, and Min Li

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B392

iSimp: A Sentence Simplification System for Biomedical Text

Yifan Peng, Catalina O. Tudor, Manabu Torii, Cathy H. Wu, and K. Vijay-Shanker

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B407

Classification of Multicolor Fluorescence In-Situ Hybridization (M-FISH) Image Using Structure Based Sparse Representation Model

Jinyao Li and Yu-Ping Wang

Medical Informatics and Translational Bioinformatics

B410

Biomarker Identification for Diagnosis of Schizophrenia with Integrated Analysis of fMRI and SNPs

Hongbao Cao and Yu-Ping Wang

Medical Informatics and Translational Bioinformatics

B414

A Hybrid Data Mining Temporal Approach for Medical Data using Self Adaptive Fuzzy Maps

Seyyed Mohamamd Reza Farshchi

Computational Systems Biology

B417

Combining gene expression and function in a spatially localized approach

Evangelia Zacharaki, Angeliki Skoura, Li An, Desmond Smith, Scott Faro, and Vasileios Megalooikonomou

Computational Systems Biology

B422

An Accurate Scalable Template-based Alignment Algorithm

David Gardner, Weijia Xu, Jamie Cannone, Daniel Miranker, Stuart Ozer, and Robin Gutell

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B430

PhylOnt: A Domain-Specific Ontology for Phylogeny Analysis

Maryam Panahiazar, Ajith Ranabahu, Vahid Taslimitehrani, Hima Yalamanchili, Arlin Stoltzfus, Jim Leebens_Mack, and Amit Sheth

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B440

A New Method for Identifying Protein-Protein Interaction by Analyzing TAP/MS Data

Xiaoyun Sun, Pengyu Hong, Meghana Kulkarni, Young Kwon, and Norbert Perrimon

Computational Systems Biology

B446

A Multi-Objective Program for Quantitative Subtyping of Clinically Relevant Phenotypes

Jiangwen Sun, Jinbo Bi, Joel Gelernter, and Henry Kranzler

Medical Informatics and Translational Bioinformatics

B447

A Novel Dynamic Graph-Based Computational Model for Predicting Salivary Gland Branching Morphogenesis

Nimit Dhulekar, Lauren Bange, Abhirami Baskaran, Daniel Yuan, Basak Oztan, Bulent Yener, Shayoni Ray, and Melinda Larsen

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B459

A two-variable model for stochastic modelling of chemical events with multi-stepreactions

Qianqian Wu, Kate Smith-Miles, and Tianhai Tian

Computational Systems Biology

B463

Identifying Protein Binding Functionality of the Cytochrome C. and Ubiquitin Protein Families by Aligned Pattern Clusters

En-Shiun Annie Lee and Andrew K. C. Wong

Computational Systems Biology

B466

Comprehensive human membrane protein database

Min-sung Kim and Gwan-Su Yi

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B467

A Weighted Hypergeometric Statistic for the Enrichment of Gene Sets

Rehman Qureshi and Ahmet Sacan

Computational Systems Biology

B468

Adaptive feature selection for array data analysis and its application to breast cancer prognostic biomarker discovery

Jie Cheng, Joel Greshock, Leming Shi, Jeff Painter, Xiwu Lin, Kwan Lee, Shu Zheng, Richard Wooster, Lajos Pusztai, and Alan Menius

Computational Systems Biology

B471

Labor Contraction Prediction via Demographic and Obstetrical Information Analysis

Zifang Huang, Mei-Ling Shyu, James Tien, David Birnbach, and Michael Vigoda

Medical Informatics and Translational Bioinformatics

B475

Fast Sparse Representation Approaches for the Classification of High-Dimensional Biological Data

Yifeng Li and Alioune Ngom

Computational Systems Biology

B477

Novel Features for Categorizing Biomedical Images

Jianqiang Sheng, Songhua Xu, and Weicai Deng

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B479

CWT-PLSR for Quantitative Analysis of Raman Spectrum

Shuo Li, Jean Gao, James Nyagilo, and Digant Dave

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B481

Estimating a gene's mutation burden by the number of observed synonymous base substitutions

Perry Evans and Michael Krauthammer

Genomics and Molecular Structure, Function and Evolution

B484

A Discrete Bayesian Network Framework for Discrimination of Gene Expression Profiles

Nikolay Balov

Computational Systems Biology

B486

A random walk based approach for improving protein-protein interaction network and protein complex prediction

Chengwei Lei and Jianhua Ruan

Computational Systems Biology

B492

Unsupervised Kernel Parameter Estimation by Constrained Nonlinear Optimization for Clustering Nonlinear Biological Data

Hyokyeong Lee and Rahul Singh

Computational Systems Biology

B498

De-noise Biological Network from Heterogeneous Sources via Link Propagation

Nan Du, Jing Gao, Vishrawas Gopalakrishna, and Aidong Zhang

Genomics and Molecular Structure, Function and Evolution

B499

A Link Prediction based Unsupervised Rank Aggregation Algorithm for Informative Gene Selection

Kang Li, Nan Du, and Aidong Zhang

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

 

2. Short Papers

PaperID

Title

Author

Category

B202

Keyword Annotation of Biomedical Documents with Graph-based Similarity Methods

Shuguang Wang

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B207

Extending the Ball-Histogram Method with Continuous Distributions and an Application to Prediction of DNA-Binding Proteins

Ondrej Kuzelka, Andrea Szaboova, and Filip Zelezny

Genomics and Molecular Structure, Function and Evolution

B218

Pre-miRNA Classification via Combinatorial Feature Mining and Boosting

Jason Wang, Ling Zhong, Dongrong Wen, and Bruce Shapiro

Genomics and Molecular Structure, Function and Evolution

B237

The Role of Eigen-matrix Translation in Classification of Biological Datasets

Hao Jiang and Wai-Ki Ching

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B240

Drug-Target Network in Myocardial Infarction: a Structural Analysis

Haiying Wang, Huiru Zheng, Francisco Azuaje, and Xingming Zhao

Computational Systems Biology

B242

Immune System Simulation: Modeling the Mast Cell

Charles da Silva, Alcione Oliveira, Maurílio Possi, Fabio Cerqueira, Andreia Gomes, Rodrigo Siqueira-Batista, and Luiz Alberto Santana

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B247

A Model of Cellular Decision Making in Photodynamic Therapy of Cancer

ioannis gkigkitzis and Xin Hua Hu

Computational Systems Biology

B249

OWA-PSSM - A Position Specific Scoring Matrix based Method Integrated with OWA Weights for HLA-DR Peptide Binding Prediction

Wen-Jun Shen and Hau-San Wong

Genomics and Molecular Structure, Function and Evolution

B251

A Semi-Supervised Learning Method for Names of Traditional Chinese Prescriptions and Drugs Recognition

Dongfeng Cai, Changlin Ding, Yu Bai, and Guiping Zhang

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B252

Similarity Analysis of Feature Ranking Techniques on Imbalanced DNA Microarray Datasets

David Dittman, Taghi Khoshgoftaar, Randall Wald, and Amri Napolitano

Computational Systems Biology

B255

Bridging Encounter Forms and Electronic Medical Record Databases: Annotation, Mapping, and Integration

Yuan An, Ritu Khare, Xiaohua Hu, and Il-Yeol Song

Healthcare Informatics

B270

Automatic Analysis Method of Protein Expression images based on Generalized Data Field

Shuliang Wang, Ying Li, Wenchen Tu, and Peng Wang

Medical Informatics and Translational Bioinformatics

B271

Using microenvironments to identify allosteric binding sites

Christopher Foley, Sana AlAzwari, Mark Dufton, and John Wilson

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B275

The Effect of Unhealthy β-cells in Synchronized Insulin Secretion

Yang Pu, Saangho Lee, David Samuels, Layne Watson, and Yang Cao

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B277

The Effect of Measurement Approach and Noise Level on Gene Selection Stability

Randall Wald, Taghi Khoshgoftaar, and Ahmad Abu Shanab

Computational Systems Biology

B282

Recognizing Drosha processing sites by a two-step prediction model with structure and sequence informaiton

Xingchi Hu, Chuang Ma, and Yanhong Zhou

Computational Systems Biology

B286

Rotation Crossover and K-Site Move Mutation for Evolutionary Protein Folding on 3D FCC HP Model

Shih-Chieh Su and Jyh-Jong Tsay

Genomics and Molecular Structure, Function and Evolution

B288

Identifying essential proteins via integration of protein interaction and gene expression data

Xi-wei Tang, Jianxin Wang, and Yi Pan

Genomics and Molecular Structure, Function and Evolution

B290

Incorporating Semantic Similarity into Clustering Process for Identifying Protein Complexes from Affinity Purification/Mass Spectrometry Data

Bingjing Cai, Haiying Wang, Huiru Zheng, and Hui Wang

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B291

Combining Homolog and Motif Similarity Data with Gene Ontology Relationships for Protein Function Prediction

Hafeez HafeezurRehman, Alfredo Benso, Stefano Di Carlo, Gianfranco Politano, Alessandro Savino, and Prashanth Suravajhala

Genomics and Molecular Structure, Function and Evolution

B295

Identifying enterotype in human microbiome by decomposing topics of probabilistic topic models into components

Xingpeng Jiang, Dushoff Jonathan, Xin Chen, and Xiaohua Hu

Genomics and Molecular Structure, Function and Evolution

B296

Modelling Non-Stationary Gene Regulatory Process with Hidden Markov Dynamic Bayesian Network

shijia zhu and yadong wang

Computational Systems Biology

B304

A New Method for Computational Drug Repositioning Using Drug Pairwise Similarity

Jiao Li and Zhiyong Lu

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B306

Uncertain interactions affect degree distribution of biological networks

Andrei Todor, Alin Dobra, and Tamer Kahveci

Computational Systems Biology

B311

Linking and Querying Genomic Datasets Using Natural Language

Bobby McKnight and I. Budak Arpinar

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B316

A Basin Hopping Algorithm for Protein-protein Docking

Irina Hashmi and Amarda Shehu

Genomics and Molecular Structure, Function and Evolution

B317

ArcheERCASE: A CASE Tool for Modeling HIS Applications with Archetypes and Analysis Patterns

André Araújo, Valéria Times, and Marcus Silva

Healthcare Informatics

B338

Accurate detection of SNPs using base-specific cleavage and mass spectrometry

Ruimin Sun, Xiang Gao, Nanyu Han, Qiong Wu, Yuguang Mu, Kai Tang, and Xin Chen

Genomics and Molecular Structure, Function and Evolution

B342

A Broad-ranging and Cost-efficient Inter-Species Microarray based on the Measurement of Orthologous Gene Expression Levels with a Single Probe

Fukuzaki Mutsumi, Masa-aki Yoshida, Atsushi Ogura, and Jun Sese

Genomics and Molecular Structure, Function and Evolution

B351

An Automated Blood Vessel Extraction Algorithm in Fundus Images

Marwan Saleh and C. Eswaran

Medical Informatics and Translational Bioinformatics

B352

Finding Enriched Regions and Genomic Features in ChIP-Seq Data

Iman Rezaeian and Luis Rueda

Genomics and Molecular Structure, Function and Evolution

B353

A Comprehensive Comparison Study on Protein-protein Interaction Network Models

Mingyu Shao, Yi Yang, Jihong Guan, and Shuigeng Zhou

Genomics and Molecular Structure, Function and Evolution

B356

Formalization of clinical trial eligibility criteria: Evaluation of a pattern-based approach

Krystyna Milian, Anca Bucur, and Annette ten Teije

Healthcare Informatics

B358

Reconstructing Isoform Graphs from RNA-Seq data

Stefano Beretta, Paola Bonizzoni, Gianluca Della Vedova, and Raffaella Rizzi

Genomics and Molecular Structure, Function and Evolution

B362

Personalized Semantic Assistance for Curation of Biochemical Literature

Fedor Bakalov, Marie-Jean Meurs, Birgitta König-Ries, Bahar Sateli, René Witte, Greg Butler, and Adrian Tsang

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B371

CTGR-Span: Efficient Mining of Cross-Timepoint Gene Regulation Sequential Patterns from Microarray Datasets

Chun-Pei Cheng, Yi-Lin Tsai, and Vincent S. Tseng

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B372

The e!DAL JAVA-API: Store, Share and Cite Primary Data in Life Sciences

Daniel Arend, Matthias Lange, Christian Colmsee, Steffen Flemming, Jinbo Chen, and Uwe Scholz

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B374

An Efficient Algorithm for Spectral Clustering of Large-Scale Mass Spectrometry Data

Fahad Saeed, Trairak Pisitkun, Mark Knepper, and Jason Hoffert

Computational Systems Biology

B377

Robust RFCM Algorithm for Identification of Co-expressed miRNAs

Sushmita Paul and Pradipta Maji

Computational Systems Biology

B379

Skeleton Timed Up and Go

Okko Lohmann, Thomas Luhmann, and Andreas Hein

Healthcare Informatics

B393

THE HUMAN IMPRINTOME v1.0: OVER 120 GENES IMPRINTED IN THE HUMAN GENOME IMPOSE A MAJOR REVIEW ON PREVIOUS CENSUSES

Samara Silva-Santiago and Diana Magalhães-Oliveira

Genomics and Molecular Structure, Function and Evolution

B394

Improved biomarker performance for the detection of hepatocellular carcinoma by inclusion of clinical parameters

Mengjun Wang, Timothy Block, Jorge Marrero, Adrian Di Bisceglie, Karthik Devarajan, and Anand Mehta

Medical Informatics and Translational Bioinformatics

B395

Extracting BI-RADS Features from Portuguese Clinical Texts

Filipe Cunha, Inês Moreira, Houssam Nassif, Ricardo Cruz-Correia, Eliana Sousa, and Inês Dutra

Medical Informatics and Translational Bioinformatics

B409

A Model to Predict and Analyze Protein-protein Interaction Types Using Electrostatic Energies

Gokul Vasudev and Luis Rueda

Genomics and Molecular Structure, Function and Evolution

B411

Building a Classifier for Identifying Sentences Pertaining to Disease-Drug Relationships in Tardive Dyskinesia

Xia Bi, Hongzhan Huang, Sherri Matis-Mitchell, Peter McGarvey, Manabu Torii, Hagit Shatkay, and Cathy Wu

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B415

Using Gene Sets to Identify Putative Drugs for Breast Cancer

Tzu-Hung Hsiao, Hung-I Harry Chen, Yidong Chen, Yu-Heng Chen, and Eric Y. Chuang

Computational Systems Biology

B419

On the Design of Advanced Filters for Biological Networks using Graph Theoretic Properties

Kathryn Dempsey, Tzu-Yi Chen, Sanjukta Bhowmick, and Hesham Ali

Computational Systems Biology

B427

De Novo Co-Assembly of Bacterial Genomes from Multiple Single Cells

Narjes Movahedi, Elmirasadat Forouzmand, and Hamidreza Chitsaz

Genomics and Molecular Structure, Function and Evolution

B437

Maps, Rates, and Fuzzy Mountains: Generating Meaningful Risk Maps

Tamara Jimenez, Chetan Tiwari, Armin Mikler, and Marty O'Neill II

Healthcare Informatics

B439

Composition of Bioinformatics Scientific Model Federations using Communication Aspects

Keith Lee and David Stotts

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B441

MDAsim: a Multiple Displacement Amplification Simulator

Zeinab Taghavi and Sorin Draghici

Genomics and Molecular Structure, Function and Evolution

B458

ENISI Visual, an agent-based simulator for modeling gut immunity

Yongguo Mei, Raquel Hontecillas, Xiaoying Zhang, Keith Bisset, Stephen Eubank, Stefan Hoops, Madhav Marathe, and Josep Bassaganya-Riera

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

B460

A Neural Network Approach to the Identification of b-/y-ions in MS/MS Spectra

James Cleveland and John Rose

Computational Systems Biology

B464

Stress induces biphasic-rewiring and modularization patterns in the metabolomic networks of Escherichia coli

Fayez Aziz, Philemon Chan, Johan Osorio, Bushra Minhas, Vaisak Parekatt, and Gustavo Caetano-Anolles

Computational Systems Biology

B470

Inferring Fuzzy Cognitive Map Models for Gene Regulatory Networks from Gene Expression Data

Ye Chen, Lawrence Mazlack, and Long Lu

Computational Systems Biology

B476

Discovering Distal Regulatory Elements by Integrating Multiple Types of Chromatin State Maps

Li Teng and Kai Tan

Computational Systems Biology

B478

Aligning Ligand Binding Cavities by Optimizing Superposed Volume

Ruobing Chen, Katya Scheinberg, and Brian Chen

Genomics and Molecular Structure, Function and Evolution

B483

Predicting Viral Infection by Selecting Informative Biomarkers From Temporal High-Dimensional Gene Expression Data

Qiang Lou and Zoran Obradovic

Healthcare Informatics

B489

ForeTell - Facilitating doctor-patient conversation through interactive information visualization of risk prediction index

Pratibha Bhaskaran, Milind Kaduskar, Preeti Saluja, Smitha Tallimani, Sandip Bhaumik, and Sanghyun Yoo

Healthcare Informatics

B491

Fully-automated Wound Identification System Based on Image Segmentation and Artificial Neural Networks

Bo Song and Ahmet Sacan

Medical Informatics and Translational Bioinformatics

B494

Drug-Drug Interaction Analysis Using Heterogeneous Biological Information Network

Kyubum Lee, Sunwon Lee, Minji Jeon, Jaehoon Choi, and Jaewoo Kang

Computational Systems Biology

B496

Placement of Unique Restriction Sites in Synthetic Genomes using Multi-Objective Optimization

Mahfuza Sharmin and Sohel Rahman

Cross-Cutting Computational Methods and Bioinformatics Infrastructure

 

 

Last update: 21 Dec 2011