Selected Publication

 

·        Hu X., Ng M., Wu F.X , Sokhansanj B, Mining, Modeling and Evaluation of Sub-Networks from Large Biomolecular Networks and its Comparison Study,  in the IEEE Transactions on Information Technology in Biomedicine, March 2009, Vol 13, No 2., pp184-194

·        Hu X., Park, E.K., Zhang X., Microarray Gene Cluster Identification and Annotation through Cluster Ensemble and EM based Informative Textual Summarization, IEEE Transactions on Information Technology in Biomedicine, Sept., 2009, Vol. 13, No. 5, pp832-840

·        Hu X., Shen X., Mining Biomedical Literature for Identification of Potential Virus/Bacteria, accepted to be published in IEEE Intelligent System

·        Zhou X., Hu X., Zhang X., Topic Signature Language Models for Ad-hoc Retrieval, in IEEE Transactions on Knowledge and Data Engineering (IEEE TKDE), Sept 2007, pp 276-287

·        Hu X., Wu D., Data Mining and Predictive Modeling of Biomolecular Network from Biomedical Literature Databases, in IEEE/ACM Transactions on Computational Biology and Bioinformatics, (April-June  2007), p251-263

·        Tang Y.C., Zhang Y-Q,  Huang Z., Hu X.,, and Zhao Y. Recursive Fuzzy Granulation for Gene Subsets Extraction and Cancer Classification, IEEE Transactions on Information Technology in Biomedicine . Vol 12, No. 6, Nov. 2008, pp 723-730

·        Hu X., Sokhansanj B, Wu D., Tang Y., A Novel Approach for Mining and Dynamic Fuzzy Simulation of Biomolecular Network, in IEEE Transactions on Fuzzy Systems (Dec., 2007) pp1219-1229

·        Cercone N., Hou L., Keselj V., An A.,. Naruedomkul N.,, Hu X., From Computational Intelligence to Web Intelligence , in IEEE Computer, November 2002, pp 72-76

·        Wu D., Hu X. Hu T.,, Exploratory Analysis of Protein Translation Regulatory Networks Using Hierarchical Random Graphs, accepted in the 2009 IEEE International Conference on Bioinformatics and Biomedicine, (IEEE BIBM09)

·        Hu X., Zhang X, Lu C., Park E.K., Zhou X.: Exploiting Wikipedia as external knowledge for document clustering, ACM SIGKDD 09: 389-396

·        Zhou X., Achananuparp P., Park E.K, Hu X., Zhang X: AskDragon: a redundancy-based factoid question answering system with lightweight local context analysis. ACM/IEEE JCDL 09: 483-484

·        Zhang X., Hu X., Zhou X., A Comparative Evaluation of Different Link Types on Enhancing Document Clustering, accepted in 31th  Annual International ACM SIGIR Conference on Research & Development on Information Retrieval (SIGIR 2008)

·        Zhou X., Zhang X., Hu X., Semantic Smoothing for Bayesian Text Classification with Small Training Data, SIAM SDM 08

·        Hu X., Wu F.X. Ng M., Sokhansanj B., Mining and Dynamic Simulation of Sub-Networks from Large Biomolecular Networks, in 2007 International Conference on Artificial Intelligence, June 25-28, Las Vegas, USA (Best Paper Award, out of 500 submissions)

·        Zhou X., Hu X., Zhang X., A Segment-based Hidden Markov Model for Real-Setting Pinyin-to-Chinese Conversion,  in the Proceedings of the ACM CIKM 2007, pp 1027-1030

·        Zhou X., Zhang X., Hu X., Semantic Smoothing of Document Models for Agglomerative Clustering,  in the Proceeding of the Twentieth International Joint Conference on Artificial Intelligence (IJCAI 07), Hyderabad, India, Jan 6-12, 2007, pp2928-2933

·        Zhou X., Hu X., Zhang X., Lin X., Song I-Y., Context-Sensitive Semantic Smoothing for the Language Modeling Approach to Genomic IR, in the Proceedings of the 29th  Annual International ACM SIGIR Conference on Research & Development on Information Retrieval (SIGIR 2006), pp 170-177

·        Hu X., Zhang X., Yoo I., Zhang Y-Q. A Semantic Approach for Mining Hidden Links from Complementary and Non-Interactive Biomedical Literature, Proceedings of the 6th SIAM International Conference on Data Mining (SIAM SDM 06), April 20-22, 2006, Bethesda, MD, USA, pp 200-209

·        Hu X., Zhang X., Zhou X., Integration of Cluster Ensemble and EM based Text Mining for Microarray Gene Cluster Identification and Annotation, in the Proceedings of ACM 15th Conference on Information and Knowledge Management (ACM CIKM 2006),

·        Zhang X., Zhou X., Hu X., Semantic Smoothing for Model-based Document Clustering, accepted in the 2006 IEEE International Conference on Data Mining (IEEE ICDM06), Dec. 18-22, 2006, HongKong

·        Yoo I., Hu X., Song I-Y., Integration of Semantic-based Bipartite Graph Representation and Mutual Refinement Strategy for Biomedical Literature Clustering, in the Proceedings of the 12th ACM SIGKDD International Conference on Knowledge Discovery and Data Mining (SIGKDD 2006)

·        Yoo I., Hu X., A Comprehensive Comparison Study of Document Clustering for A Biomedical Digital Library MEDLINE, in the Proceedings of the 2006 ACM/IEEE Joint Conference on Digital Library (ACM/IEEE JCDL 2006), June 11-15, 2006, Chapel Hill, NC, USA, pp 220-229

·        Hu X., Yoo I., Song M., Zhang Y., Song I-Y., Mining Undiscovered Public Knowledge from Complementary and Non-interactive Biomedical Literature through Semantic Pruning, in ACM Fourteen Conference on Information and Knowledge Management (ACM CIKM 2005)

·        Hu X., Yoo I., Song I-Y., Song M., Han J., Lechner M., Extracting and Mining Protein-Protein Interaction Network from Biomedical Literature, in the Proceedings of the 2004 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (IEEE CIBCB 2004), Oct. 7-8, 2004, San Diego, USA, (Best Paper Award), pp 244-251

·        Hu X., Lin T.Y, Song I-Y., Lin X., Yoo I., Lechner M., Song M., Ontology-based Scalable and Portable Information Extraction System to Extract Biological Knowledge from Huge Collection of Biomedical Web Documents, in the Proceedings of the 2004 IEEE/ACM Web Intelligence Conference, Sept, 2004 (nominated for Best Paper Award), pp77-83

·        Hu X., Using Rough Set Theory and Database Operations to Construct a Good Ensemble of Classifier for Data Mining Application, in the Proceedings of the IEEE 2001 International conference in Data Mining (IEEE ICDM 2001), 233-240, Nov 29-Dec 2, 2001, San Jose, CA 2001, pp 233-240

·        Hu X., Cercone N., Mining Knowledge Rules from Databases: An Attribute-Oriented Rough Set Approach,  in the Proceedings of 12th IEEE International Conf. on Data Engineering, (ICDE96), New Orleans, LA, USA , Feb 27-March 1, 1996, pp 96-105

·        Hu X., Cercone N., Rough Sets Similarity-Based Learning From Databases, in the Proceedings of the 1st International Conference on Knowledge Discovery and Data Mining, Montreal (KDD 95), Canada, August 1995, pp 162-167

·        Hu X., Cercone N., Discovery of Decision Rules from Databases: A Rough Set Approach, in the Proceedings of the ACM 1st Third International Conference on Information and Knowledge Management (ACM CIKM'94), 392-400, Gaithersburg, Maryland, USA, Nov., 1994, pp 392-340